Entries in PROSITE release
ACCno DOCno DOC-stat profile-ID short description
PS50152 PDOC00653 released 25A_SYNTH_3 2'-5'-oligoadenylate synthase N-terminal region profile.
PS50183 QDOC50182 incomplete 53EXO_I_DOMAIN 5'3'-Exonuclease I-domain.
PS50182 QDOC50182 incomplete 53EXO_N_DOMAIN 5'3'-Exonuclease N-domain.
PS50260 QDOC50260 preliminary 7TM_NEMATODE 7-Helix G-protein coupled receptor, nematode (probably olfactory) family.
PS50141 PDOC50141 released A_DEAMIN_EDITASE Adenosine to inosine editase domain profile.
PS50862 PDOC00363 released AA_TRNA_LIGASE_II Aminoacyl-transfer RNA synthetases class-II profile.
PS50860 PDOC00363 released AA_TRNA_LIGASE_II_ALA Alanyl-transfer RNA synthetases profile.
PS50861 PDOC00363 released AA_TRNA_LIGASE_II_GLYAB Heterodimeric glycyl-transfer RNA synthetases profile.
PS50075 PDOC00012 released ACP_DOMAIN Acyl carrier protein phosphopantetheine domain profile.
PS50215 PDOC50215 released ADAM_MEPRO ADAM type metalloprotease domain profile.
PS50233 PDOC00247 released AEROLYSIN_MTX2 Aerolysin/Mosquito toxin 2 domain.
PS50844 PDOC50844 released AFP_LIKE Antifreeze protein-like domain profile.
PS50210 QDOC50210 incomplete AKAP_DOMAIN Protein kinase A anchoring domain.
PS50310 PDOC50099 released ALA_RICH Alanine-rich region profile.
PS50285 PDOC00191 released AMINO_ACID_PERMEASE_2 Permeases for amino acids and related compounds, family I.
PS01178 PDOC00906 released ANAPHYLATOXIN_2 Anaphylatoxin domain profile.
PS50297 PDOC50088 released ANK_REP_REGION Ankyrin repeat region circular profile.
PS50088 PDOC50088 released ANK_REPEAT Ankyrin repeat profile.
PS50248 QDOC50248 preliminary APC_SEN3_REPEAT Repeat in APC and proteasome components (3 copies).
PS50115 PDOC50115 released ARFGAP ARF GTPase-activating proteins domain profile.
PS50323 PDOC50099 released ARG_RICH Arginine-rich region profile.
PS50176 PDOC50176 released ARM_REPEAT Armadillo/plakoglobin ARM repeat profile.
PS50286 PDOC00513 released AROMATIC_AA_PERM_2 Permeases for amino acids and related compounds, family II.
PS50321 PDOC50099 released ASN_RICH Asparagine-rich region profile.
PS50175 PDOC00128 released ASP_PROT_RETROV Aspartyl protease, retroviral type profile.
PS50312 PDOC50099 released ASP_RICH Aspartic acid-rich region profile.
PS50101 PDOC00017 released ATP_GTP_A2 P-loop nucleotide binding motif (does not find all).
PS50188 QDOC50188 preliminary B302 B30.2-like domain profile.
PS50217 PDOC00036 released B_ZIP Basic-leucine zipper transcription factor family.
PS50057 PDOC00566 released BAND_41_3 Band 4.1 family domain profile.
PS50062 PDOC00829 released BCL2_FAMILY BCL2-like apoptosis inhibitors (spans part of BH3, BH1 and BH2).
PS50197 PDOC50197 released BEACH BEACH domain profile.
PS50063 PDOC00829 released BH4_2 Apoptosis regulator, Bcl-2 family BH4 domain profile.
PS50213 QDOC50213 incomplete BIGH3_DOMAIN Beta-Ig-H3/Fasciclin domain.
PS50143 PDOC00987 released BIR_REPEAT_2 BIR repeat profile.
PS50281 PDOC00364 released BPD_TRANSP_INN_MEMB_2 Binding-system dependent bacterial transporters (araH, livH/limM families);.
PS50279 PDOC00252 released BPTI_KUNITZ_2 Pancreatic trypsin inhibitor (Kunitz) family profile.
PS50138 PDOC50138 released BRCA2_REPEAT BRCA2 repeat profile.
PS50172 PDOC50172 released BRCT BRCT domain profile.
PS50833 QDOC50833 preliminary BRIX Brix domain profile.
PS50014 PDOC00550 released BROMODOMAIN_2 Bromodomain profile.
PS50097 PDOC50097 released BTB BTB domain profile.
PS50004 PDOC00380 released C2_DOMAIN_2 C2-domain profile.
PS50041 PDOC00537 released C_TYPE_LECTIN_2 C-type lectin domain profile.
PS50268 PDOC00205 released CADHERIN_2 Cadherins domain profile.
PS50245 PDOC00660 released CAP_GLY_2 CAP-Gly domain profile.
PS50209 PDOC50209 released CARD CARD caspase recruitment domain profile.
PS50207 PDOC00864 released CASPASE_P10 Caspase family p10 domain profile.
PS50208 PDOC00864 released CASPASE_P20 Caspase family p20 domain profile.
PS50266 QDOC50266 empty CATION_CHANNEL_TM Cation channels, 6TM region (non-ligand gated).
PS50272 QDOC50272 empty CATION_CHANNEL_TRPL Cation channels, 6TM region (transient receptor potential subtype).
PS50291 PDOC00321 released CDP_ALCOHOL_P_TRANS_2 CDP-alcohol phosphatidyltransferases profile.
PS50021 PDOC50021 released CH Calponin homology domain profile.
PS50273 QDOC50273 empty CHANNEL_PORE_CA_NA Calcium and sodium channel pore region (S4-S6).
PS50265 QDOC50265 incomplete CHANNEL_PORE_K Pore region of potassium channels.
PS50839 PDOC50839 released CHASE CHASE domain profile.
PS50122 PDOC50122 released CHEB CheB-type methylesterase catalytic domain profile.
PS50295 PDOC00434 released CHEMOKINES Chemokines of CC, CxC, CxxxC and related types (includes pro-domain).
PS50123 PDOC50123 released CHER CheR-type methyltransferase profile.
PS50013 PDOC00517 released CHROMO_2 Chromo and chromo shadow domain profile.
PS50236 QDOC50236 preliminary CLATHRIN_REPEAT 7-fold repeat in Clathrin, also in VPS proteins.
PS50042 PDOC00691 released CNMP_BINDING_3 cAMP/cGMP binding motif profile.
PS50288 QDOC50288 empty COLLAGEN_REP Collagen repeat (G-x-x), circular profile.
PS50073 PDOC00863 released COPPER_FIST_2 Copper-fist domain profile.
PS50253 PDOC50253 released COX3 Heme-copper oxidase subunit III profile.
PS50301 PDOC00214 released CR1A Cytokine receptor class 1 family-specific domain B.
PS50299 QDOC50299 empty CR2A Cytokine receptor class 2 family FN3-like domain A.
PS50300 QDOC50299 empty CR2B Cytokine receptor class 2 family FN3-like domain B.
PS50191 PDOC50191 released CRAL_TRIO CRAL-TRIO lipid binding domain profile.
PS50108 PDOC50108 released CRIB CRIB motif profile.
PS50072 PDOC00154 released CSA_PPIASE_2 Cyclophilin-type peptidyl-prolyl cis-trans isomerase profile.
PS01225 PDOC00912 released CTCK_2 C-terminal cystine knot profile.
PS01180 PDOC00908 released CUB CUB domain profile.
PS50069 PDOC00967 released CULLIN_2 Cullin family profile.
PS50849 QDOC50849 CUPIN Cupin domain profile.
PS50560 QDOC50560 preliminary CUT_HOMEODOMAIN Cut-homeodomain profile.
PS50203 QDOC50203 empty CYS_PROT_CALPAIN Calpain-type cystein-protease.
PS50311 PDOC50099 released CYS_RICH Cysteine-rich region profile.
PS50255 PDOC00170 released CYTOCHROME_B5_2 Cytochrome b5 family, heme-binding domain profile.
PS50100 QDOC50100 empty DA_BOX 2nd half motif for nucleotide binding, associated with P-loop.
PS50081 PDOC00379 released DAG_PE_BIND_DOM_2 Phorbol esters / diacylglycerol binding domain profile.
PS50146 QDOC50146 empty DAGK DAG-kinase domain.
PS50824 PDOC50824 released DAPIN DAPIN domain profile.
PS50309 PDOC50309 released DC Doublecortin domain profile.
PS50827 QDOC50827 preliminary DDT DDT domain profile.
PS50017 PDOC50017 released DEATH_DOMAIN Death domain profile.
PS50168 PDOC50168 released DED Death effector domain (DED) profile.
PS50211 QDOC50211 empty DENN_DOMAIN DENN/aex-3 domain.
PS50186 PDOC50186 released DEP DEP domain profile.
PS50010 PDOC00605 released DH_2 Dbl homology (DH) domain profile.
PS50214 PDOC00351 released DISINTEGRIN_2 Disintegrin domain profile.
PS50841 QDOC50841 DIX DIX domain profile.
PS50809 PDOC50809 released DM_DOMAIN_2 DM domain profile.
PS50160 PDOC00295 released DNA_LIGASE_A3 ATP-dependent DNA ligase profile.
PS50161 PDOC00295 released DNA_LIGASE_A4 Eukaryotic ATP-dependent DNA ligase homology domain 2.
PS50076 PDOC00553 released DNAJ_2 dnaJ domain profile.
PS50836 QDOC50836 preliminary DOMON DOMON domain profile.
PS50139 PDOC50139 released DRADA_REPEAT DRADA repeat profile.
PS50022 QDOC50022 empty DS_DOMAIN Discoidin domain (FA5/8 type C domain).
PS50137 PDOC50137 released DS_RBD Double stranded RNA-binding domain (dsRBD) profile.
PS50040 PDOC01001 released EF1G Elongation factor 1 gamma chain profile.
PS50222 PDOC00018 released EF_HAND_2 Ca-binding EF-hand motif.
PS50026 PDOC00021 released EGF_2_DOMAIN EGF-like domain (EGF-subtype).
PS50034 PDOC00913 released EGF_CA_2 Calcium binding EGF domain.
PS50027 PDOC00961 released EGF_LAM EGF-like domain (laminin-subgroup).
PS50031 PDOC50031 released EH EH domain profile.
PS50187 QDOC50187 empty ESTERASE Esterase/lipase/thioesterase active site serine.
PS50061 PDOC00374 released ETS_DOMAIN_3 Ets-domain profile.
PS50843 PDOC50842 released EXPANSIN_CBD Expansin, Cellulose-binding-like domain profile.
PS50842 PDOC50842 released EXPANSIN_EG45 Expansin, family-45 endoglucanase-like domain profile.
PS50181 PDOC50181 released FBOX F-box domain profile.
PS50133 PDOC50133 released FCH FCH domain profile.
PS50006 PDOC50006 released FHA_DOMAIN Forkhead-associated (FHA) domain profile.
PS50194 PDOC50194 released FILAMIN_REPEAT Filamin/ABP280 repeat profile.
PS50218 QDOC50218 empty FIZZY_DOMAIN FIZZY/CDC20 domain.
PS50059 PDOC00426 released FKBP_PPIASE_3 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.
PS50264 QDOC50264 empty FMN_ENZYMES Proteins binding FMN and related compounds (core region profile).
PS50039 PDOC00564 released FORK_HEAD_3 Fork head domain profile.
PS50810 PDOC01043 released FRATAXIN_2 Frataxin family profile.
PS50038 PDOC50038 released FZ Frizzled (fz) domain profile.
PS50180 QDOC50180 empty G_ADAPT_CT Gamma-adaptin C-terminal domain.
PS50174 PDOC50174 released G_PATCH G-patch domain profile.
PS50058 PDOC01002 released G_PROTEIN_GAMMA G-protein gamma subunit profile.
PS50262 PDOC00210 released G_PROTEIN_RECEP_F1_2 G-protein coupled receptors family 1 profile.
PS50227 PDOC00559 released G_PROTEIN_RECEP_F2_3 G-protein coupled receptors family 2 profile 1.
PS50261 PDOC00559 released G_PROTEIN_RECEP_F2_4 G-protein coupled receptors family 2 profile 2.
PS50259 PDOC00754 released G_PROTEIN_RECEP_F3_4 G-protein coupled receptors family 3 profile.
PS50813 QDOC50813 preliminary GAF GAF domain.
PS50114 PDOC00300 released GATA_ZN_FINGER_2 GATA-type zinc finger domain profile.
PS50807 QDOC50807 preliminary GCM GCM motif profile.
PS50091 QDOC50091 empty GELS Gelsolin repeat.
PS50322 PDOC50099 released GLN_RICH Glutamine-rich region profile.
PS01033 PDOC00793 released GLOBIN Globins profile.
PS50313 PDOC50099 released GLU_RICH Glutamic acid-rich region profile.
PS50315 PDOC50099 released GLY_RICH Glycine-rich region profile.
PS50167 QDOC50167 empty GLYC_TRANS General Glycosyltransferase domain.
PS50239 QDOC50239 empty GLYCEROL_ACYLTRANS Phospholipid and glycerol acyltransferase (from 'motifs_6.msf').
PS50277 PDOC00623 released GLYCO_HORMONE_ALPHA_3 Glycoprotein hormones alpha chain profile.
PS50221 PDOC50221 released GPS GPS domain profile.
PS50847 PDOC00373 released GRAM_POS_ANCHORING Gram-positive cocci surface proteins LPxTG motif profile.
PS50009 PDOC00594 released GRF_CDC25 cdc25 domain (cdc25 rasGRF family).
PS50405 QDOC50401 preliminary GST_C Glutathione S-transferase profile (C-terminal sub-domain).
PS50404 QDOC50401 preliminary GST_N Glutathione S-transferase profile (N-terminal sub-domain).
PS50125 PDOC00425 released GUANYLATE_CYCLASES_2 Guanylate cyclases profile.
PS50052 PDOC00670 released GUANYLATE_KINASE_2 Guanylate kinase domain profile.
PS50829 QDOC50829 preliminary GYF GYF domain profile.
PS50077 PDOC50077 released HEAT_REPEAT HEAT repeat profile.
PS50237 PDOC50237 released HECT HECT domain profile.
PS50136 PDOC00039 released HELICASE DNA/RNA helicase domain (DEAD/DEAH box).
PS50037 PDOC00038 released HELIX_LOOP_HELIX_2 bHLH (basic-helix-loop-helix) domain.
PS50230 QDOC50230 preliminary HEMOLYSIN_PORE Combined Leucocidin/ASH4 hemolysin profile.
PS50120 QDOC50120 preliminary HHH Helix-hairpin-helix motif.
PS50834 PDOC50834 released HIN_200 HIN-200 A and B domains profile.
PS50109 PDOC50109 released HIS_KIN Histidine kinase domain profile.
PS50316 PDOC50099 released HIS_RICH Histidine-rich region profile.
PS50028 QDOC50028 preliminary HIST_TAF Histone-fold/TFIID-TAF/NF-Y domain.
PS50888 PDOC00038 released HLH_2 Myc-type, 'helix-loop-helix' domain profile.
PS50846 PDOC00804 released HMA_2 Heavy-metal-associated domain profile.
PS50118 QDOC50118 preliminary HMG High-mobility group (HMG) family.
PS50065 PDOC00064 released HMG_COA_REDUCTASE_4 Hydroxymethylglutaryl-coenzyme A reductases profile.
PS50071 PDOC00027 released HOMEOBOX_2 'Homeobox' domain profile.
PS50815 QDOC50815 preliminary HORMA HORMA domain profile.
PS50140 QDOC50140 preliminary HSF_ETS HSF/ETS DNA-binding domain.
PS01031 PDOC00791 released HSP20 Heat shock hsp20 proteins family profile.
PS01124 PDOC00040 released HTH_ARAC_FAMILY_2 Bacterial regulatory proteins, araC family DNA-binding domain profile.
PS50116 QDOC50116 incomplete HTH_FIS_FAMILY Helix-Turn-Helix fis-type.
PS50043 QDOC50043 preliminary HTH_LUXR Helix-turn-helix domain, luxR and related types (substantial overlap with lysR type).
PS50825 QDOC50825 preliminary HYR HYR domain profile.
PS50835 QDOC50835 preliminary IG_LIKE IG-like domain profile.
PS50317 PDOC50099 released ILE_RICH Isoleucine-rich region profile.
PS50166 PDOC50166 released IMPORTIN_B_NT Importin-beta N-terminal domain profile.
PS50107 PDOC00215 released INTEGRIN_ALPHA_2 Integrin alpha chain repeat (incomplete).
PS50818 PDOC00687 released INTEIN_C_TER Intein C-terminal splicing motif profile.
PS50819 PDOC50819 released INTEIN_ENDONUCLEASE Intein DOD homing endonuclease domain profile.
PS50817 PDOC00687 released INTEIN_N_TER Intein N-terminal splicing motif profile.
PS50251 QDOC50251 empty INTRON_ENDONUC Domain in intron-encoded endonucleases and maturases.
PS50096 PDOC50096 released IQ IQ motif profile.
PS50531 QDOC50530 IS21_TRANSPOSASE HTH DOMAIN OF IS21-LIKE ELEMENT TRANSPOSASE.
PS50532 QDOC50530 IS408_TRANSPOSASE HTH DOMAIN OF IS408-LIKE ELEMENT TRANSPOSASE.
PS50032 QDOC50032 empty KA1 Kinase associated domain 1.
PS50084 PDOC50084 released KH_TYPE_1 Type-1 KH domain profile.
PS50823 PDOC50084 released KH_TYPE_2 Type-2 KH domain profile.
PS50067 PDOC00343 released KINESIN_MOTOR_DOMAIN2 Kinesin motor domain profile.
PS50805 PDOC50805 released KRAB Krueppel-associated box (KRAB) profile.
PS50806 PDOC50806 released KRAB_RELATED KRAB-related domain profile.
PS50070 PDOC00020 released KRINGLE_2 Kringle domain profile.
PS50025 PDOC50025 released LAM_G_DOMAIN Laminin G domain profile.
PS50820 PDOC50820 released LCCL LCCL domain profile.
PS50068 PDOC00929 released LDLRA_2 LDL-receptor class A (LDLRA) domain profile.
PS50319 PDOC50099 released LEU_RICH Leucine-rich region profile.
PS50095 QDOC50095 empty LH2 Lipoxygenase homology 2 region (contact khofmann@isrec-sun1.unil.ch).
PS50023 PDOC00382 released LIM_DOMAIN_2 LIM domain profile.
PS50558 QDOC50558 preliminary LIM_HOMEODOMAIN LIM homeodomain profile.
PS50241 PDOC00842 released LIPASE_GDSL Lipase/Acylhydrolase with GDSL-like motif.
PS50098 QDOC50098 empty LRI A-latrotoxin receptor interaction domain.
PS50500 QDOC50500 preliminary LRR_BACT_20 Bacterial 20-residue LRR profile.
PS50501 QDOC50500 preliminary LRR_CC Cysteine-containing LRR profile.
PS50502 QDOC50500 preliminary LRR_PS Plant specific LRR profile.
PS50503 QDOC50500 preliminary LRR_RI Ribonuclease inhibitor-like LRR profile.
PS50504 QDOC50500 preliminary LRR_SDS22 SDS22+-like LRR profile.
PS50505 QDOC50500 preliminary LRR_TP Treponema pallidum (Tp) LRR profile.
PS50506 QDOC50500 preliminary LRR_TYPICAL Typical LRR profile.
PS50212 QDOC50212 incomplete LTE_DOMAIN LTE1/rasGRF-associated domain.
PS50318 PDOC50099 released LYS_RICH Lysine-rich region profile.
PS50066 PDOC00302 released MADS_BOX_2 MADS-box domain profile.
PS50838 PDOC50838 released MAGE MAGE conserved domain profile.
PS50060 PDOC00604 released MAM_2 MAM domain profile.
PS50051 PDOC00662 released MCM_2 MCM family domain profile.
PS50111 PDOC00465 released MCP MCP (methyl-accepting chemetoxis protein) intracellular domain.
PS50320 PDOC50099 released MET_RICH Methionine-rich region profile.
PS50124 QDOC50124 empty MET_TRANS Generic methyl-transferase profile.
PS50850 QDOC50850 MFS Generated from MSF file: 'MFS5w.msf'.
PS50249 QDOC50249 preliminary MPN_DOMAIN Proteasome regulatory component N-terminal domain.
PS50202 QDOC50202 empty MSP_DOMAIN SCS2/MSP (Major sperm protein) domain.
PS50090 PDOC00037 released MYB_3 Myb DNA-binding domain repeat profile.
PS50267 PDOC00533 released NA_NEUROTRAN_SYMP_3 Sodium:neurotransmitter symporter family profile.
PS50283 PDOC00429 released NA_SOLUT_SYMP_3 Sodium:solute symporter family profile.
PS50837 PDOC50837 released NACHT NACHT-NTPase domain profile.
PS50205 QDOC50205 empty NAD_BINDING NAD binding site.
PS50816 QDOC50816 preliminary NAF NAF domain profile.
PS50189 QDOC50189 empty NETRIN_CT Netrin C-terminal domain (also in complement factors 3/4/5).
PS50270 PDOC00221 released NGF_2 Nerve growth factor family profile.
PS50263 PDOC00712 released NITRIL_CHT_3 Nitrilase/cyanide-hydratase/amidase catalytic domain (active site Cys).
PS50079 QDOC50079 incomplete NLS_BP Bipartite nuclear localization signal.
PS50258 QDOC50258 preliminary NOTCH_LIN_REPEAT Repeated extracellular domain in Notch, lin-12 and glp-1.
PS50177 PDOC50177 released NTF2_DOMAIN Nuclear transport factor 2 domain profile.
PS50803 PDOC50803 released OAR OAR domain profile.
PS50802 PDOC50802 released OTU OTU domain profile.
PS50840 QDOC50840 PA Protease-associated domain profile.
PS50226 QDOC50226 empty PA_PHOSPHATASE PA-phosphatase and other phosphomonoesterases.
PS50129 QDOC50129 empty PABP Poly-adenylate binding protein, unique domain.
PS50113 PDOC50112 released PAC PAC domain profile.
PS50148 QDOC50148 preliminary PALP_1 Pyridoxalphosphate dependent enzymes.
PS50276 PDOC00238 released PANCREATIC_HORMONE_2 Pancreatic hormone family profile.
PS50153 QDOC50153 empty PAP PAP/25A domain (polyA-related domain).
PS50155 QDOC50155 empty PAP_ASSOCIATED PAP/25A associated domain.
PS50154 QDOC50154 empty PAP_CORE PAP/25A core domain.
PS50064 PDOC00360 released PARP_ZN_FINGER_2 Poly(ADP-ribose) polymerase zinc finger domain profile.
PS50112 PDOC50112 released PAS PAS repeat profile.
PS50552 QDOC50552 preliminary PAX Paired-like homeodomain profile.
PS50821 PDOC50821 released PAZ PAZ domain profile.
PS50250 QDOC50250 preliminary PCI_DOMAIN Domain in components of the proteasome, COP9-complex, and IF3.
PS50278 PDOC00222 released PDGF_2 Platelet-derived growth factor (PDGF) family profile.
PS50106 PDOC50106 released PDZ PDZ domain profile.
PS50292 QDOC50292 preliminary PEROXIDASE_3 Myeloperoxidase, thyroid peroxidase, cyclooxygenase catalytic domain.
PS50003 PDOC50003 released PH_DOMAIN PH domain profile.
PS50314 PDOC50099 released PHE_RICH Phenylalanine-rich region profile.
PS50185 QDOC50185 empty PHOSPHO_ESTER Metallo-phosphoesterase motif.
PS50046 PDOC00218 released PHYTOCHROME_2 Phytochrome chromophore attachment site domain profile.
PS50290 PDOC00710 released PI3_4_KINASE_3 Phosphatidylinositol 3- and 4-kinases profile.
PS01179 PDOC00907 released PID Phosphotyrosine interaction domain (PID) profile.
PS50007 PDOC50007 released PIPLC_X_DOMAIN Phosphatidylinositol-specific phospholipase X-box domain profile.
PS50008 PDOC50007 released PIPLC_Y_DOMAIN Phosphatidylinositol-specific phospholipase Y-box domain profile.
PS50256 PDOC00718 released PIR_REPEAT_2 Yeast PIR proteins repeats profile.
PS50822 PDOC50822 released PIWI Piwi domain profile.
PS50093 PDOC50093 released PKD Polycystic kidney disease (PKD) domain profile.
PS50035 PDOC50035 released PLD Phospholipase D phosphodiesterase active site profile.
PS50078 PDOC50078 released POLO_BOX POLO box domain profile.
PS50550 QDOC50550 preliminary POU_HOMEODOMAIN POU-homeodomain profile.
PS50169 QDOC50169 empty PP2C_1 Protein phosphatase 2C, box 1.
PS50170 QDOC50170 empty PP2C_2 Protein phosphatase 2C, box 2.
PS50198 PDOC00840 released PPIC_PPIASE_2 PpiC-type peptidyl-prolyl cis-trans isomerase profile.
PS50099 PDOC50099 released PRO_RICH Proline-rich region profile.
PS50247 QDOC50247 preliminary PROTEASOME_PROTEASE Multispecific proteases of the proteasome.
PS50011 PDOC00100 released PROTEIN_KINASE_DOM Protein kinase domain profile.
PS50303 QDOC50302 incomplete PUM_REP Pumilio RNA-binding domain (one repeat unit).
PS50302 QDOC50302 incomplete PUM_REPEATS Pumilio RNA-binding domain (repeat region).
PS50812 PDOC50812 released PWWP PWWP domain profile.
PS50195 PDOC50195 released PX PX domain profile.
PS50200 QDOC50200 empty RA_DOMAIN Ras-associated domain.
PS50086 QDOC50086 empty RAB_GAP RabGAP/TBC domain.
PS50196 PDOC50196 released RANBD1 Ran binding domain type 1 profile.
PS50229 QDOC50229 preliminary RANBP1_WASP Combined RanBP1/WASP domain.
PS50085 QDOC50085 empty RAP_GAP_3 Rap/ran-GAP.
PS50018 PDOC00438 released RAS_GTPASE_ACTIV_2 Ras GTPase-activating proteins profile.
PS50243 QDOC50243 empty RASGAP_CTERM Domain frequently found at C-terminus of rasGAP domain.
PS50012 PDOC00544 released RCC1_3 Regulator of chromosome condensation (RCC1) profile.
PS50526 QDOC50520 RDRP_BIRNA Profile for RNA-directed RNA polymerase of Birnaviridae.
PS50525 QDOC50520 RDRP_FLU Profile for RNA-directed RNA polymerase of negative-strand RNA viruses with segmented genome.
PS50524 QDOC50520 RDRP_MONONEGAVIRALES Profile for RNA-directed RNA polymerase of Mononegavirales.
PS50522 QDOC50520 RDRP_PHAGE Profile for RNA-directed RNA polymerase of RNA-containing bacteriophages.
PS50507 QDOC50520 RDRP_POSITIVE Profile for RNA-directed RNA polymerase of positive-strand RNA eukariotic viruses.
PS50523 QDOC50520 RDRP_REO Profile for RNA-directed RNA polymerase of Reoviridae.
PS50521 QDOC50520 RDRP_VIRAL Profile for RNA-directed RNA polymerase of double-strand RNA and positive-strand RNA viruses.
PS50162 PDOC00131 released RECA_2 RecA family profile 1.
PS50163 PDOC00131 released RECA_3 RecA family profile 2.
PS50254 PDOC00924 released REL_2 NF-kappa-B/Rel/dorsal domain profile.
PS50220 QDOC50220 incomplete REM_REPEAT PKN/rhophilin/rhotekin rho-binding repeat.
PS50110 PDOC50110 released RESPONSE_REGULATORY Response regulatory domain profile.
PS50845 PDOC50845 released RETICULON Reticulon domain profile.
PS50150 QDOC50150 preliminary RFC Replication factor C conserved domain.
PS50132 PDOC50132 released RGS RGS domain profile.
PS50238 QDOC50238 empty RHO_GAP RhoGAP domain.
PS50206 QDOC50206 preliminary RHODANESE Rhodanese/cdc25 fold.
PS50159 QDOC50159 empty RIBO_S13 Ribosomal protein S13/S18 family.
PS50231 PDOC50231 released RICIN_B_LECTIN Lectin domain of ricin B chain profile.
PS50142 PDOC00448 released RNASE_3_2 Ribonuclease III family domain profile.
PS50219 QDOC50219 preliminary ROM_MOTIF ROM/Citron/NIK putative rho binding motif.
PS50102 PDOC00030 released RRM Eukaryotic RNA Recognition Motif (RRM) profile.
PS50232 PDOC00293 released RTX_REPEAT RTX (repeat in structural toxin) repeat, 4 units.
PS50826 QDOC50826 preliminary RUN RUN domain profile.
PS50126 PDOC50126 released S1 S1 domain profile.
PS50832 PDOC50126 released S1_IF1_TYPE S1 domain IF1 type profile.
PS50244 PDOC50244 released S5A_REDUCTASE Steroid 5-alpha reductase C-terminal domain profile.
PS50275 PDOC50275 released SAC Sac phosphatase domain profile.
PS50193 QDOC50193 preliminary SAM_BIND SAM (and some other nucleotide) binding motif.
PS50105 PDOC50105 released SAM_DOMAIN SAM domain profile.
PS50864 PDOC50864 released SAND SAND domain profile.
PS50015 QDOC50015 preliminary SAP_B Saposin type B domain.
PS50800 QDOC50800 preliminary SAP_MOTIF Sap motif.
PS50121 QDOC50121 empty SBP_GLUR Solute binding protein/glutamate receptor domain.
PS50804 PDOC50804 released SCAN_BOX SCAN box profile.
PS50024 PDOC50024 released SEA SEA domain profile.
PS50190 PDOC50190 released SEC7 SEC7 domain profile.
PS50324 PDOC50099 released SER_RICH Serine-rich region profile.
PS50280 PDOC50280 released SET SET domain profile.
PS50001 PDOC50001 released SH2 Src homology 2 (SH2) domain profile.
PS50002 PDOC50002 released SH3 Src homology 3 (SH3) domain profile.
PS50044 PDOC00593 released SIGMA54_3 Sigma-54 factors family profile.
PS50045 PDOC00579 released SIGMA54_INTERACT_4 Sigma-54 interaction domain profile.
PS50305 PDOC50305 released SIRTUIN Sirtuin catalytic domain profile.
PS50553 QDOC50553 preliminary SIX_DOMAIN SIX domain profile.
PS50554 QDOC50553 preliminary SIX_HOMEODOMAIN SIX/SINE homeodomain profile.
PS50131 QDOC50130 incomplete SKP1_CT SKP1 C-terminal domain.
PS50130 QDOC50130 incomplete SKP1_NT SKP1 N-terminal domain.
PS50828 QDOC50828 preliminary SMR Smr domain profile..
PS50147 QDOC50147 empty SNF4_REP SNF4 repeat.
PS50225 PDOC50225 released SOCS SOCS box domain profile.
PS50831 QDOC50831 preliminary SOHO SoHo domain profile.
PS50083 QDOC50083 empty SPEC_REPEAT Spectrin repeat.
PS50224 QDOC50224 preliminary SPRY SPRY domain profile.
PS50287 PDOC00348 released SRCR_2 SRCR domain profile.
PS50074 PDOC00596 released SRP1_TIP1_2 Seripauperin_family (cold shock and other potentially protective proteins).
PS50156 PDOC50156 released SSD Sterol-sensing domain (SSD) profile.
PS50848 PDOC50848 released START START domain profile.
PS50801 PDOC50801 released STAS STAS domain profile.
PS50228 PDOC50228 released SUEL_LECTIN SUEL-type lectin domain profile.
PS50296 PDOC00862 released SUI1_2 Translation initiation factor SUI1 profile.
PS50242 QDOC50242 empty SUR2_DOMAIN SUR2-type hydroxylase/desature catalytic domain.
PS50128 QDOC50128 empty SURP SURP module found in splicing regulators.
PS50192 PDOC50192 released T_SNARE t-SNARE coiled-coil homology domain profile.
PS50149 PDOC00201 released TAU_MAP_2 MAP/TAU repeat.
PS50252 PDOC00972 released TBOX_3 T-box domain profile.
PS50269 PDOC00223 released TGF_BETA_2 C-terminal domain in TGF-beta and other growth factors. Related to cystine knot.
PS50298 QDOC50298 preliminary TGFB_RECEPTOR TGF-beta receptor family, extracellular domain.
PS50223 PDOC00172 released THIOREDOXIN_2 Thioredoxin-domain (does not find all).
PS50325 PDOC50099 released THR_RICH Threonine-rich region profile.
PS50104 PDOC50104 released TIR TIR domain profile.
PS50257 PDOC00371 released TM4_2 Tetraspanin/TM4 family. (mainly leukocyte antigens).
PS50830 PDOC00865 released TNASE_3 Thermonuclease domain profile.
PS50049 PDOC00224 released TNF_2 TNF family profile.
PS50050 PDOC00561 released TNFR_NGFR_2 TNFR/NGFR family cysteine-rich region domain profile.
PS50293 QDOC50005 preliminary TPR_REGION TPR repeat region, circular profile;.
PS50005 QDOC50005 preliminary TPR_REPEAT TPR repeat.
PS50144 QDOC50144 preliminary TRAF TRAF-domain (including meprin).
PS50284 QDOC50284 empty TRANSP_CYT_PUR Permeases for cytosine/purines, uracil, thiamine, allantoin.
PS50282 QDOC50282 empty TRANSP_LYSE_YGGA Bacterial transmembrane transporters, lysE/yggA family.
PS50327 PDOC50099 released TRP_RICH Tryptophan-rich region profile.
PS50240 PDOC00124 released TRYPSIN_DOM Serine proteases, trypsin domain profile.
PS50092 PDOC50092 released TSP1 Thrombospondin type I repeat (TSP1) profile.
PS50304 PDOC50304 released TUDOR Tudor domain profile.
PS50056 PDOC00323 released TYR_PHOSPHATASE_2 Tyrosine specific protein phosphatases profile.
PS50054 PDOC00323 released TYR_PHOSPHATASE_DUAL Dual specificity protein phosphatase profile.
PS50055 PDOC00323 released TYR_PHOSPHATASE_PTP PTP type protein phosphatase profile.
PS50328 PDOC50099 released TYR_RICH Tyrosine-rich region profile.
PS50030 QDOC50030 preliminary UBA Ubiquitin-associated domain.
PS50204 QDOC50204 preliminary UBA_NAD UBA/THIF-type NAD binding fold.
PS50246 QDOC50246 incomplete UBACT_REPEAT Repeat in ubiquitin-activating (UBA) proteins.
PS50053 PDOC00271 released UBIQUITIN_2 Ubiquitin domain profile.
PS50127 PDOC00163 released UBIQUITIN_CONJUGAT_2 Ubiquitin-conjugating enzymes profile.
PS50235 PDOC00750 released UCH_2_3 Ubiquitin carboxyl-terminal hydrolases family 2 profile.
PS50330 QDOC50330 preliminary UIM Ubiquitin-interaction motif in MJD1, Epsin-like proteins and others, 'rep_13.msf'.
PS50600 PDOC50600 released ULP_PROTEASE Ubiquitin-like protease family profile.
PS50173 QDOC50173 preliminary UMUC_DOMAIN UMUC domain (DNA-repair).
PS50151 PDOC50151 released UVR UVR domain profile.
PS50164 QDOC50164 preliminary UVRC_1 UvrC homology region 1.
PS50165 QDOC50164 preliminary UVRC_2 UvrC homology region 2.
PS50033 QDOC50033 preliminary UX_DOMAIN UBA-associated domain, possibly distant ubiquitin homologues.
PS50326 PDOC50099 released VAL_RICH Valine-rich region profile.
PS50179 PDOC50179 released VHS VHS domain profile.
PS50234 PDOC50234 released VWFA VWFA domain profile.
PS50184 PDOC00928 released VWFC_2 von Willbrand factor type C domain.
PS50082 PDOC00574 released WD_REPEATS_2 Trp-Asp (WD) repeats profile.
PS50294 PDOC00574 released WD_REPEATS_REGION Trp-Asp (WD) repeats circular profile.
PS50814 QDOC50814 preliminary WIF WIF module profile.
PS50811 PDOC50811 released WRKY WRKY domain profile.
PS50020 PDOC50020 released WW_DOMAIN_2 WW/rsp5/WWP domain profile.
PS50119 PDOC50119 released ZF_BBOX Zinc finger B-box type profile.
PS50808 PDOC50808 released ZF_BED Zinc finger BED type profile.
PS50103 QDOC50103 preliminary ZF_CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar).
PS50158 PDOC50158 released ZF_CCHC Zinc finger CCHC-type profile.
PS50216 PDOC50216 released ZF_DHHC Zinc finger DHHC-type profile.
PS50178 PDOC50178 released ZF_FYVE Zinc finger FYVE/FYVE-related type profile.
PS50171 PDOC50171 released ZF_MATRIN Zinc finger matrin type profile.
PS50016 PDOC50016 released ZF_PHD_2 Zinc finger PHD-type profile.
PS50199 PDOC50199 released ZF_RANBP2_2 Zinc finger RanBP2 type profile.
PS50089 PDOC00449 released ZF_RING_2 Zinc finger RING type profile.
PS50134 QDOC50134 preliminary ZF_TAZ TAZ finger.
PS50145 PDOC50145 released ZF_TRAF Zinc finger TRAF-type profile.
PS50271 QDOC50271 preliminary ZF_UBP Zn-finger in ubiquitin-hydrolases and other proteins.
PS50135 PDOC50135 released ZF_ZZ_2 Zinc finger ZZ type profile.
PS50157 PDOC00028 released ZINC_FINGER_C2H2_2 Zinc finger C2H2 type domain profile.
PS50048 PDOC00378 released ZN2_CY6_FUNGAL_2 Fungal Zn(2)-Cys(6) binuclear cluster domain profile.
PS90001 QDOC90000 preliminary BIASED_COMP_REGION Extended region of low complexity.
PS90000 QDOC90000 preliminary LOW_COMPLEXITY Region of low-complexity (local).