The Death-domain
A heterodimerization domain present in several proteins involved in
apoptotic signal transduction and the NFkB pathway.
This page is based on the publication:
Hofmann K. and Tschopp J. (1995),
The death domain motif found in Fas(Apo-1) and TNF receptor is present
in proteins involved in apoptosis and axonal guidance
FEBS Lett. 371:321-323
Short description
The death domain has initially been characterized as a intracellular
homology domain of FAS (Apo-1) and the TNF-receptor, which is important for
apoptotic signaling in both receptors [1].
Subsequently, a number of other proteins have been found to interact with the
cytoplasmic part of either FAS or the TNF receptor in the region of the death
domain. Overexpression of these proteins usually leads to cell death. By
profile analysis, we have shown that a number of other proteins contain
regions with significant similarity to the death domain. Interestingly,
several of these proteins also work in the context of cell death signaling.
The list of death domain containing proteins comprises the FAS, TNF-receptor,
NGF-receptor, several receptor-interacting proteins( MORT1/FADD, TRADD, RIP)
all isoforms of ankyrin, the human 'death-associated protein kinase'
(DAP-kinase), MyD88, the axonal guidance molecule unc-5, and the protein
kinase pelle, acting in the drosophila toll/dorsal/cactus pathway which has
analogies to the mammalian NFkB pathway. In a related paper, Feinstein et
al. also reported death domains in NFkB and tube. These domains have
borderline significance in our profile analysis.
[1] Cleveland J., Ihle J.N., Cell 81:479-482 (1995).
[2] Feinstein E., Kimchi A., Wallach D., Boldin M., Varfolomeev E.,
Trends Biochem. Sci. 20:342-344 (1995).
PROSITE
The death domain is included in PROSITE under the accession numbers
PS50017
for the data entry, and
PDOC50017
for the documentation entry. The alignment used for construction of the profile
is available in
MSF format.
There is also an updated list of database
sequences containing death domains.
Domain cartoons
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[Postscript]
Abbreviations: TR: TNFR-family Cys-rich repeat; A: Ankyrin-repeat;
DD: death domain; Ig: Immunoglobulin domain; toll: IL1R/toll domain.
Links to WWW-pages describing some of these
domains can be found near the bottom of this page.
Alignment of representative sequences
[gif]
[Postscript]
Note: You can check your sequence for the occurence of this and other
domains by using the
ProfileScan server.
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